Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940733.1_cds_XP_016484877.1_75850
CDS Infomation

[gene=LOC107805357] [db_xref=GeneID:107805357] [protein=protein trichome birefringence-like] [protein_id=XP_016484877.1] [location=join(28175..29328,29711..29903,30192..30385,30464..30622,30845..31199)] [gbkey=CDS]
Sequence

ATGGATACAGCAAAATATACACCCATTAATGGTGGAAAAACTCTCTTTACAGACCTGAAA
GCTCACTTCTCTTTTCTGAAAACCAAAAGAACTGTTACTTGTGCATATGGGTTCATGTTT
GTATTCGTTGCTGTTACATTTTTCTTGGCTTTTAGTCCTTCCCCTAACTCTTCTTCTCCT
TGGTTCACAAACATTTTCTCTTTAAGCAGTAGCACTAGTACTAGTGGAACTATTTCTACA
ACATCAGCTCCGATTTCCTCTGATCAATCTTATGGATCTCACTTTTCTTCAGTTTACTCT
TACTTTTTTCCCAACTCTTCACAGCAAGTTCAAAACTTTACTACTCCCAGATCCCAAAAC
TCAACATTTGAGCCTCCCAATTTGCAAAAAGAATTGGGTATTGGGAAAAATGTGACTTCA
AATAATGACTCACATGATAAAGTTGAAGTCTTGAAAAACCCCTTGAAGCCTTCTGTGAAT
GTGACAGCTCAAAAATCTTCTTCTGGGTCGAATCAAGAATCATCAAGTGTAAAGAATCAG
TCCCAAAGTAAAGATTTTGATGATAAAGTTGGAGTATTGAAGGCAAATCAGAGCTCAAAT
TCAGCACCAAAATCTTCTTCTGGAACTAATAAAGAATCATCAAGCCCAAAGAAGCAGACC
CAAAGTAAAGATTTTGATGATAAAGTTGGAGTCTTGAAGGCAAATCAGAGCTCAAATTCA
GCACCAAAATCTTCTTCTGGAACTAATAAAGAATCATCAAGCGCAAAGAATCAGCCCCAA
AGTAAAGATTTTGATGATAAAGTTGGAGTCTTGAAGGCAAATCAGACAACAAATTCAGCA
CCAAAATCTGCTAATGGGAGTAAAGAGAAAGAAATTGAGGGAGTGAAGAGTAATTTCACA
TCCTCGTTTGTGAAAAAACAGAGTAATGGGACTAACTTAGATGTGTCGGCGAAGAAGAAG
GATGAAGATGTGGTTAAGTCTTTGTTGGATTGTGATTTCTTTGATGGGAATTGGGTGAAA
GATGAGTCTTACCCTTTGTATAAACCTGGTTCTTGTTCTCTTATTGATGAGCAATTCAAC
TGTTTTCTCAATGGTAGACCTGATAGTAATTACATTAAAATGAAATGGAAGCCCAATGCC
TGTACTCTTCCAAGATTGAATGGCACTCATATGCTGGAATTATTGAGAGGAAAAAAATTA
GTATTTGTTGGTGATTCACTCAATAGGAACATGTGGGAATCACTTGTTTGCATACTTAGA
AACTCTGTAAAAGATCAGAAGAAGGTTTATGAAGAATTTGGGAGACACCATTTTAGGACA
GAAGCTTCCTATTCATTTCTATTCGAAGAGTACAATTGCAGAGTGGAGTTCTTTGTATCT
CCTTTCTTGGTTCAAGAATGGGAATTTGCAGATAAAAAAGGAGTGAAGAAGGAAACTCTT
AGACTTGATTTAATTGGACAGTCTGCTGATAAATATAAAAATGCAGATATATTAATCTTC
AACACCGGCCACTGGTGGACTCACGAGAAGACTTCCTTGGGGAAGGACTATTATCAAGAA
GGAAGTCACGTGTACAGCGAATTAGATGTCCTTGAGGCATTTCGAAAAGCTTTAACAACA
TGGGGAAGATGGATTGATTCCCATGTAAATCCCCACAAGACATTTGTTCTCTTTAGAGGT
TATTCTGCATCTCATTTTAGTGGTGGACAGTGGAATTCTGGTGGAGCTTGTGACCATGAA
ACAGAACCAATCAAGAACAACACATATCTTACTCCTTATCCATCTAAGATGAATGTATTG
GAGAGAGTCTTGAGAGGAATGAAAACTCAAGTCTCCTATCTGAATGTCACAAGAATGACA
GATTATAGAAAAGATGGTCACCCATCAATATATAGGAAACAAAAATTGACCAATGAGGAG
AAAAAATCTGAATTGTTGTTCCAAGATTGCAGCCATTGGTGCCTCCCTGGTGTACCTGAT
GCTTGGAATGAGCTTCTATATGCCAAACTTTTAGTAAATCAACACATGAAAAAACAAGAT
GACAAAAAGACATAG

Peptide Sequence

PEP ID

XP_016484877.1
PEP Infomation

PREDICTED: protein trichome birefringence-like [Nicotiana tabacum]
Sequence

MDTAKYTPINGGKTLFTDLKAHFSFLKTKRTVTCAYGFMFVFVAVTFFLAFSPSPNSSSP
WFTNIFSLSSSTSTSGTISTTSAPISSDQSYGSHFSSVYSYFFPNSSQQVQNFTTPRSQN
STFEPPNLQKELGIGKNVTSNNDSHDKVEVLKNPLKPSVNVTAQKSSSGSNQESSSVKNQ
SQSKDFDDKVGVLKANQSSNSAPKSSSGTNKESSSPKKQTQSKDFDDKVGVLKANQSSNS
APKSSSGTNKESSSAKNQPQSKDFDDKVGVLKANQTTNSAPKSANGSKEKEIEGVKSNFT
SSFVKKQSNGTNLDVSAKKKDEDVVKSLLDCDFFDGNWVKDESYPLYKPGSCSLIDEQFN
CFLNGRPDSNYIKMKWKPNACTLPRLNGTHMLELLRGKKLVFVGDSLNRNMWESLVCILR
NSVKDQKKVYEEFGRHHFRTEASYSFLFEEYNCRVEFFVSPFLVQEWEFADKKGVKKETL
RLDLIGQSADKYKNADILIFNTGHWWTHEKTSLGKDYYQEGSHVYSELDVLEAFRKALTT
WGRWIDSHVNPHKTFVLFRGYSASHFSGGQWNSGGACDHETEPIKNNTYLTPYPSKMNVL
ERVLRGMKTQVSYLNVTRMTDYRKDGHPSIYRKQKLTNEEKKSELLFQDCSHWCLPGVPD
AWNELLYAKLLVNQHMKKQDDKKT

Transcript Sequence

Gene sequence data has not been registered.